home
research
multimodal protein structure
automated NMR assignment
proteinase inhibitor design
spatial aggregation
matrix assessment
publications
lab
teaching
personal
|
Many important science and engineering applications require
interpreting data and designing controls for spatially distributed
systems. For example, in order to predict the weather, meteorologists
utilize massive amounts of pressure, temperature, and wind velocity
data collected from spatially distributed sensors. Similarly, in
designing aircraft with minimal drag, engineers study wind tunnel and
simulation data specifying airflow over a body at many points and over
many instants of time. Recent advances in the fabrication of
low-cost, large-scale arrays of microelectromechanical systems (MEMS)
have enabled the construction of "smart matter" systems that integrate
sensing, computation, and actuation at a fine grain.
Interpretation and control tasks for distributed physical systems
encounter a number of challenges. Spatial properties (e.g. variations
in material property and boundary conditions) make it hard to apply
analytic methods to determine closed-form solutions. Data
interpretation can be challenged by the massive amount of data, either
collected from arrays of sensors or produced by simulations running on
fine-grained discretizations. Local methods must aggregate
distributed sensor information; global objectives must be achieved by
local actuators. In order to overcome these challenges, applications
must utilize physical properties such as continuity and locality,
which give rise to regions of uniformity in spatially distributed
data. The Spatial Aggregation Language (SAL) allows
researchers to specify and utilize relevant physical knowledge to
uncover abstract descriptions of spatial data. As illustrated above,
SAL transforms a numerical input field (such as temperature throughout
a room or wind velocity vectors sampled across the country) to
successively higher-level descriptions by applying a small set of
operators to each layer, given appropriate metrics, neighborhood
relations, and equivalence relations. SAL is applicable to a wide
range of other problem domains; following are some examples.
| Decentralized control design |
 |
Applications such as controlling the temperature distribution over
a semiconductor wafer and controlling the noise of a photocopy machine
require designing decentralized controllers that achieve a global
control objective via local sensing and actuation. For example, in a
"local warming" approach to thermal regulation, a set of distributed
point heat sources must work together to control the global
temperature distribution over a piece of material, but each heat
source only affects some local region. We have developed a novel
approach to decentralized control design, called influence-based model
decomposition, and applied it in the context of thermal regulation.
Influence-based model decomposition uses a decentralized model, called
an influence graph, as a key data abstraction representing influences
of controls on distributed physical fields (e.g. the figure shows the
effect of one point heat sources on the thermal field for a P-shaped
piece of material). The influence graph serves as the basis for novel
algorithms for control placement and parameter design for systems with
large numbers of coupled variables. These algorithms exploit physical
knowledge of locality, linear superposability, and continuity,
encapsulated in influence graphs. [Bailey-Kellogg and Zhao] |
| Weather data interpretation |
 |
In analyzing spatial data sets such as weather data experts often
perceive and reason about these physical fields in terms of abstract
spatial objects, also called features or patterns, that evolve and
interact with each other. For example, meteorologists identify and
explicitly label aggregate weather features such as high/low pressure
centers, pressure troughs, thermal packings, fronts, and jet streams.
The experts then use weather rules to correlate these features and
establish prediction patterns. A SAL approach to weather data
interpretation extracts features such as troughs using a multi-level
approach. First, the algorithm extracts salient iso-bar segments using
an iterative thresholding technique. It builds a neighborhood
structure for the segments from a Delaunay triangulation of
iso-points. It then classifies the neighborhood relations and uses the
strong adjacencies to extract the linear structures among the segments
to obtain troughs. [Huang and Zhao] |
| Diffusion-reaction morphogenesis |
 |
A number of physical, chemical, and biological phenomena can be
modeled by diffusion-reaction systems (e.g. the Gray-Scott model of
glycolysis). It is important to identify and track coherent
structures in spatio-temporal fields for such systems; the study may
shed light on how nature constructs and evolves structures that
exhibit a high degree of regularity. A SAL approach adaptively
samples a spatial field using a particle system, aggregates the
sampling particles into a neighborhood graph, classifies the structure
into coherent regions, and tracks the regions over time to produce a
qualitative description of the temporal evolution of the field.
Because the adaptive sampling grid varies smoothly with the temporal
evolution of the underlying field, the algorithm is able to
efficiently track the corresponding objects over successive time
frames by minimally updating the grid. [Ordóñez and
Zhao] |
| Dynamical system analysis |
 |
Spatial Aggregation generalizes KAM [Yip 1991], MAPS [Zhao 1994],
and a number of other programs for analyzing nonlinear dynamical
systems. According to modern dynamical systems theory, the
qualitative behaviors of a nonlinear dynamical system can be described
by the geometric features in phase space. Once the appropriate
metrics and equivalence relations are defined, SAL can naturally
express the operations in analyzing dynamics in phase space, as the
trajectory interpretation example has already illustrated. [Zhao] |
The C++ version of SAL has grown a bit stale. We are currently porting
versions of the code to Java and Matlab. Please contact me (CBK) if you
are interested.
Collaborators
|