Software

• MaDCaT – a protein structure search tool (Mapping of Distances for the Categorization of Topology.

• DrawCoil 1.0 – a web-based program for creating coiled-coil helical wheel diagrams.

• CCCP – Coiled-Coil Crick Parameterization; programs for fitting Crick parameters to coiled-coil structures and generations of ideal structures from parameters.

• CLEVER 1.0 – Cluster Expansion Version 1.0; a C++ package for the application of the Cluster Expansion (CE) methodology. CE can be used to express any protein property as an analytical function of the amino-acid sequence.

Information

• Dynamics Derivatives – a mathematical treatment of Cartesian partial derivatives of internal degrees of freedom (distance, angle, dihedral angle).

For the lab

• Lab Wiki